BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B08LP1|AL427267
(945 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1136 1862 0.0
>3x_Contig1136
Length = 5035
Score = 1862 bits (936), Expect = 0.0
Identities = 940/944 (99%)
Strand = Plus / Minus
Query: 1 agcatatgctcgcccatttagttcttatgcggcccttttggcaaagaaaaaaggcaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3708 agcatatgctcgcccatttagttcttatgcggcccttttggcaaagaaaaaaggcaagac 3649
Query: 61 aagtggaaaaccaggaaaggctgacaatgaagagcctatcgagataatagatgtcaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3648 aagtggaaaaccaggaaaggctgacaatgaagagcctatcgagataatagatgtcaagaa 3589
Query: 121 gtatgtcatcgacgctactaaacaatttgagaagactcttgaattgcacaaaaggaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3588 gtatgtcatcgacgctactaaacaatttgagaagactcttgaattgcacaaaaggaaatt 3529
Query: 181 ggctgagcaaaaagttggaaccgcaagcccaacaattttcaatgatttgagagtaggtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3528 ggctgagcaaaaagttggaaccgcaagcccaacaattttcaatgatttgagagtaggtaa 3469
Query: 241 agaaggacaaaagtttacggaactagctgcgaccagtttgaagggtaggaatgctcttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3468 agaaggacaaaagtttacggaactagctgcgaccagtttgaagggtaggaatgctcttat 3409
Query: 301 tgtgactgtttttgatcctaaagataccaaamatattgttagtgccattatggcagcagg 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3408 tgtgactgtttttgatcctaaagataccaaaaatattgttagtgccattatggcagcagg 3349
Query: 361 tttaaatttaaaccccgagagaattcctaataatgatcaacagcttaaagtttctctccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3348 tttaaatttaaaccccgagagaattcctaataatgatcaacagcttaaagtttctctccc 3289
Query: 421 accaatcacaacagagacacgccaagcagtctgtaaagacctaaagaaagtattcgaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3288 accaatcacaacagagacacgccaagcagtctgtaaagacctaaagaaagtattcgaaga 3229
Query: 481 ttacaagcactctgccctgaaggaatccttgggccatgtccgtggcgaaataatgaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3228 ttacaagcactctgccctgaaggaatccttgggccatgtccgtggcgaaataatgaaaga 3169
Query: 541 attaaagcatctacaaaaaaagaatgacgatgtcaaamaggttattcaagatgttgaaaa 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3168 attaaagcatctacaaaaaaagaatgacgatgtcaaaaaggttattcaagatgttgaaaa 3109
Query: 601 gattcacaaagaatataccattaaactacaagaacaattgaaacaagcagagaaaagcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3108 gattcacaaagaatataccattaaactacaagaacaattgaaacaagcagagaaaagcgt 3049
Query: 661 aatgaaccaataggtgtatcgtttttcttaaagccatgttcttttcaaatgagcgctata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3048 aatgaaccaataggtgtatcgtttttcttaaagccatgttcttttcaaatgagcgctata 2989
Query: 721 cgagctttctgtaaaaaagggcagtacacagattcaattcttgtcaatattttagcgaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2988 cgagctttctgtaaaaaagggcagtacacagattcaattcttgtcaatattttagcgaag 2929
Query: 781 agtgtacgttcgttttacatacaaaccgatatgtatttatagattgattaawgtccgaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2928 agtgtacgttcgttttacatacaaaccgatatgtatttatagattgattaaagtccgaag 2869
Query: 841 atgtgatatcagtgtcgtgtgcwtcataatagaatcaatactcttttctatcagttcgca 900
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2868 atgtgatatcagtgtcgtgtgcttcataatagaatcaatactcttttctatcagttcgca 2809
Query: 901 ttttttgctaaagagactaaggattttatccgttgccaagtaga 944
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2808 ttttttgctaaagagactaaggattttatccgttgccaagtaga 2765
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7983
Number of Sequences: 1807
Number of extensions: 7983
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)